Ortholog Set 4063007

Ortholog Set 4063027

Analysis ID 4063007
Cluster ID 1410
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 4063028

Analysis ID 4063027
Cluster ID 1410
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 4063029

Analysis ID 4063028
Cluster ID 1410
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 4063030

Analysis ID 4063029
Cluster ID 1410
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 4063031

Analysis ID 4063030
Cluster ID 1410
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 4063033

Analysis ID 4063031
Cluster ID 1410
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 4063034

Analysis ID 4063033
Cluster ID 1410
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 4063035

Analysis ID 4063034
Cluster ID 1410
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 4063038

Analysis ID 4063035
Cluster ID 1410
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 4063039

Analysis ID 4063038
Cluster ID 1410
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 4063040

Analysis ID 4063039
Cluster ID 1410
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 4063041

Analysis ID 4063040
Cluster ID 1410
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 4063042

Analysis ID 4063041
Cluster ID 1410
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 4063043

Analysis ID 4063042
Cluster ID 1410
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 4063045

Analysis ID 4063043
Cluster ID 1410
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 4063025

Analysis ID 4063045
Cluster ID 1410
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 4063024

Analysis ID 4063025
Cluster ID 1410
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 4063023

Analysis ID 4063024
Cluster ID 1410
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 4063014

Analysis ID 4063023
Cluster ID 1410
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 4063012

Analysis ID 4063014
Cluster ID 1410
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 4063011

Analysis ID 4063012
Cluster ID 1410
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 4063010

Analysis ID 4063011
Cluster ID 1410
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 4063016

Analysis ID 4063010
Cluster ID 1410
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 4063017

Analysis ID 4063016
Cluster ID 1410
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 4063009

Analysis ID 4063017
Cluster ID 1410
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 4063019

Analysis ID 4063009
Cluster ID 1410
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 4063020

Analysis ID 4063019
Cluster ID 1410
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 4063021

Analysis ID 4063020
Cluster ID 1410
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 4063022

Analysis ID 4063021
Cluster ID 1410
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 4063008

Analysis ID 4063022
Cluster ID 1410
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 4063013

Analysis ID 4063008
Cluster ID 1410
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0
Analysis ID 4063013
Cluster ID 1410
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0
Analysis Type Reciprocal Best Blast

No Ortholuge analysis performed on these strains. This may be the case when there is a very short phylogenetic distance between ingroup strains relative to an outgroup species.

Ingroup 1

StrainPseudomonas putida S16
GI339486049
Locus TagPPS_1122
DescriptionIS111A/IS1328/IS1533, transposase
StrainPseudomonas putida S16 GI339485074 Locus TagPPS_0133 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339488000 Locus TagPPS_3099 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339488000 Locus TagPPS_3099 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339488000 Locus TagPPS_3099 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339486049 Locus TagPPS_1122 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339486049 Locus TagPPS_1122 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339489562 Locus TagPPS_4679 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339485074 Locus TagPPS_0133 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339485074 Locus TagPPS_0133 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339485074 Locus TagPPS_0133 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339489562 Locus TagPPS_4679 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339489562 Locus TagPPS_4679 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339489562 Locus TagPPS_4679 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339486049 Locus TagPPS_1122 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339488000 Locus TagPPS_3099 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339486049 Locus TagPPS_1122 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339486049 Locus TagPPS_1122 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339485074 Locus TagPPS_0133 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339489562 Locus TagPPS_4679 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339489562 Locus TagPPS_4679 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339488000 Locus TagPPS_3099 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339485074 Locus TagPPS_0133 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339485074 Locus TagPPS_0133 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339488000 Locus TagPPS_3099 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339486049 Locus TagPPS_1122 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339488000 Locus TagPPS_3099 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339489562 Locus TagPPS_4679 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339485074 Locus TagPPS_0133 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339486049 Locus TagPPS_1122 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339488000 Locus TagPPS_3099 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339489562 Locus TagPPS_4679 DescriptionIS111A/IS1328/IS1533, transposase

Inparalog 1

StrainPseudomonas putida S16
GI339488069
Locus TagPPS_3170
DescriptionIS111A/IS1328/IS1533/IS116/IS110/IS902, transposase

Inparalog 1

StrainPseudomonas putida S16
GI339488069
Locus TagPPS_3170
DescriptionIS111A/IS1328/IS1533/IS116/IS110/IS902, transposase

Inparalog 1

StrainPseudomonas putida S16
GI339488069
Locus TagPPS_3170
DescriptionIS111A/IS1328/IS1533/IS116/IS110/IS902, transposase

Inparalog 1

StrainPseudomonas putida S16
GI339488069
Locus TagPPS_3170
DescriptionIS111A/IS1328/IS1533/IS116/IS110/IS902, transposase

Inparalog 1

StrainPseudomonas putida S16
GI339488069
Locus TagPPS_3170
DescriptionIS111A/IS1328/IS1533/IS116/IS110/IS902, transposase

Inparalog 1

StrainPseudomonas putida S16
GI339488069
Locus TagPPS_3170
DescriptionIS111A/IS1328/IS1533/IS116/IS110/IS902, transposase

Inparalog 1

StrainPseudomonas putida S16
GI339488069
Locus TagPPS_3170
DescriptionIS111A/IS1328/IS1533/IS116/IS110/IS902, transposase

Inparalog 1

StrainPseudomonas putida S16
GI339488069
Locus TagPPS_3170
DescriptionIS111A/IS1328/IS1533/IS116/IS110/IS902, transposase

Ingroup 2

StrainPseudomonas putida NBRC 14164
GI512685853
Locus TagPP4_27960
Descriptionputative transposase
StrainPseudomonas putida NBRC 14164 GI512685853 Locus TagPP4_27960 Descriptionputative transposase StrainPseudomonas putida NBRC 14164 GI512686269 Locus TagPP4_32120 Descriptionputative transposase StrainPseudomonas putida NBRC 14164 GI512684250 Locus TagPP4_11930 Descriptionputative transposase StrainPseudomonas putida NBRC 14164 GI512683753 Locus TagPP4_06960 Descriptionputative transposase StrainPseudomonas putida NBRC 14164 GI512684231 Locus TagPP4_11740 Descriptionputative transposase StrainPseudomonas putida NBRC 14164 GI512683734 Locus TagPP4_06770 Descriptionputative transposase StrainPseudomonas putida NBRC 14164 GI512686269 Locus TagPP4_32120 Descriptionputative transposase StrainPseudomonas putida NBRC 14164 GI512683753 Locus TagPP4_06960 Descriptionputative transposase StrainPseudomonas putida NBRC 14164 GI512683734 Locus TagPP4_06770 Descriptionputative transposase StrainPseudomonas putida NBRC 14164 GI512684231 Locus TagPP4_11740 Descriptionputative transposase StrainPseudomonas putida NBRC 14164 GI512684708 Locus TagPP4_16510 Descriptionputative transposase StrainPseudomonas putida NBRC 14164 GI512684250 Locus TagPP4_11930 Descriptionputative transposase StrainPseudomonas putida NBRC 14164 GI512688436 Locus TagPP4_53790 Descriptionputative transposase StrainPseudomonas putida NBRC 14164 GI512684708 Locus TagPP4_16510 Descriptionputative transposase StrainPseudomonas putida NBRC 14164 GI512684231 Locus TagPP4_11740 Descriptionputative transposase StrainPseudomonas putida NBRC 14164 GI512684250 Locus TagPP4_11930 Descriptionputative transposase StrainPseudomonas putida NBRC 14164 GI512688436 Locus TagPP4_53790 Descriptionputative transposase StrainPseudomonas putida NBRC 14164 GI512684250 Locus TagPP4_11930 Descriptionputative transposase StrainPseudomonas putida NBRC 14164 GI512683734 Locus TagPP4_06770 Descriptionputative transposase StrainPseudomonas putida NBRC 14164 GI512685853 Locus TagPP4_27960 Descriptionputative transposase StrainPseudomonas putida NBRC 14164 GI512684708 Locus TagPP4_16510 Descriptionputative transposase StrainPseudomonas putida NBRC 14164 GI512686269 Locus TagPP4_32120 Descriptionputative transposase StrainPseudomonas putida NBRC 14164 GI512684708 Locus TagPP4_16510 Descriptionputative transposase StrainPseudomonas putida NBRC 14164 GI512688436 Locus TagPP4_53790 Descriptionputative transposase StrainPseudomonas putida NBRC 14164 GI512686269 Locus TagPP4_32120 Descriptionputative transposase StrainPseudomonas putida NBRC 14164 GI512683734 Locus TagPP4_06770 Descriptionputative transposase StrainPseudomonas putida NBRC 14164 GI512683753 Locus TagPP4_06960 Descriptionputative transposase StrainPseudomonas putida NBRC 14164 GI512688436 Locus TagPP4_53790 Descriptionputative transposase StrainPseudomonas putida NBRC 14164 GI512683753 Locus TagPP4_06960 Descriptionputative transposase StrainPseudomonas putida NBRC 14164 GI512685853 Locus TagPP4_27960 Descriptionputative transposase StrainPseudomonas putida NBRC 14164 GI512684231 Locus TagPP4_11740 Descriptionputative transposase