Ortholog Set 4042931

Ortholog Set 4042932

Analysis ID 4042931
Cluster ID 954
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 4042933

Analysis ID 4042932
Cluster ID 954
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 4042935

Analysis ID 4042933
Cluster ID 954
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 4042936

Analysis ID 4042935
Cluster ID 954
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 4042937

Analysis ID 4042936
Cluster ID 954
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0
Analysis ID 4042937
Cluster ID 954
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0
Analysis Type Reciprocal Best Blast

No Ortholuge analysis performed on these strains. This may be the case when there is a very short phylogenetic distance between ingroup strains relative to an outgroup species.

Ingroup 1

StrainPseudomonas putida S16
GI339489473
Locus TagPPS_4590
DescriptionISPsy24, transposase OrfB
StrainPseudomonas putida S16 GI339489473 Locus TagPPS_4590 DescriptionISPsy24, transposase OrfB StrainPseudomonas putida S16 GI339487302 Locus TagPPS_2389 DescriptionISPsy24, transposase OrfB StrainPseudomonas putida S16 GI339487302 Locus TagPPS_2389 DescriptionISPsy24, transposase OrfB StrainPseudomonas putida S16 GI339485119 Locus TagPPS_0180 DescriptionISPsy24, transposase OrfB StrainPseudomonas putida S16 GI339485119 Locus TagPPS_0180 DescriptionISPsy24, transposase OrfB

Ingroup 2

StrainPseudomonas putida ND6
GI395448439
Locus TagYSA_08894
Descriptionputative integrase
StrainPseudomonas putida ND6 GI395448613 Locus TagYSA_09211 Descriptionputative integrase StrainPseudomonas putida ND6 GI395448613 Locus TagYSA_09211 Descriptionputative integrase StrainPseudomonas putida ND6 GI395448439 Locus TagYSA_08894 Descriptionputative integrase StrainPseudomonas putida ND6 GI395448613 Locus TagYSA_09211 Descriptionputative integrase StrainPseudomonas putida ND6 GI395448439 Locus TagYSA_08894 Descriptionputative integrase

Inparalogs to Ingroup 2

StrainPseudomonas putida ND6
GI38638547
Locus TagND102
Descriptionputative integrase
StrainPseudomonas putida ND6
GI38638547
Locus TagND102
Descriptionputative integrase
StrainPseudomonas putida ND6
GI38638547
Locus TagND102
Descriptionputative integrase