Ortholog Set 3967140

Ortholog Set 3967141

Analysis ID	3967140
Cluster ID	409
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0

Ortholog Set 3967142

Analysis ID	3967141
Cluster ID	409
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0

Ortholog Set 3967143

Analysis ID	3967142
Cluster ID	409
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0

Ortholog Set 3967144

Analysis ID	3967143
Cluster ID	409
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0

Ortholog Set 3967145

Analysis ID	3967144
Cluster ID	409
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0

Ortholog Set 3967146

Analysis ID	3967145
Cluster ID	409
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0

Ortholog Set 3967147

Analysis ID	3967146
Cluster ID	409
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0

Ortholog Set 3967148

Analysis ID	3967147
Cluster ID	409
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0

Analysis ID	3967148
Cluster ID	409
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0
Analysis Type	Reciprocal Best Blast No Ortholuge analysis performed on these strains. This may be the case when there is a very short phylogenetic distance between ingroup strains relative to an outgroup species.

Ingroup 1

Strain	Pseudomonas aeruginosa DK2
GI	392986949
Locus Tag	PADK2_27865
Description	secreted protein Hcp

StrainPseudomonas aeruginosa DK2 GI392985022 Locus TagPADK2_18160 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa DK2 GI392986949 Locus TagPADK2_27865 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa DK2 GI392985022 Locus TagPADK2_18160 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa DK2 GI392981672 Locus TagPADK2_01310 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa DK2 GI392985022 Locus TagPADK2_18160 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa DK2 GI392986949 Locus TagPADK2_27865 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa DK2 GI392981672 Locus TagPADK2_01310 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa DK2 GI392981672 Locus TagPADK2_01310 Descriptionsecreted protein Hcp

Ingroup 2

Strain	Pseudomonas aeruginosa B136-33
GI	478481724
Locus Tag	G655_27725
Description	secreted protein Hcp

StrainPseudomonas aeruginosa B136-33 GI478479721 Locus TagG655_17660 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa B136-33 GI478479721 Locus TagG655_17660 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa B136-33 GI478481724 Locus TagG655_27725 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa B136-33 GI478479721 Locus TagG655_17660 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa B136-33 GI478479571 Locus TagG655_16910 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa B136-33 GI478479571 Locus TagG655_16910 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa B136-33 GI478481724 Locus TagG655_27725 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa B136-33 GI478479571 Locus TagG655_16910 Descriptionsecreted protein Hcp