Ortholog Set 3960935

Ortholog Set 3960936

Analysis ID	3960935
Cluster ID	4991
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0

Ortholog Set 3960937

Analysis ID	3960936
Cluster ID	4991
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0

Ortholog Set 3960938

Analysis ID	3960937
Cluster ID	4991
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0

Ortholog Set 3960939

Analysis ID	3960938
Cluster ID	4991
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0

Ortholog Set 3960940

Analysis ID	3960939
Cluster ID	4991
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0

Ortholog Set 3960941

Analysis ID	3960940
Cluster ID	4991
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0

Ortholog Set 3960942

Analysis ID	3960941
Cluster ID	4991
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0

Ortholog Set 3960943

Analysis ID	3960942
Cluster ID	4991
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0

Analysis ID	3960943
Cluster ID	4991
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0
Analysis Type	Reciprocal Best Blast No Ortholuge analysis performed on these strains. This may be the case when there is a very short phylogenetic distance between ingroup strains relative to an outgroup species.

Ingroup 1

Strain	Pseudomonas aeruginosa M18
GI	386056327
Locus Tag	PAM18_0258
Description	secreted protein Hcp

StrainPseudomonas aeruginosa M18 GI386059680 Locus TagPAM18_3619 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa M18 GI386061444 Locus TagPAM18_5387 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa M18 GI386056327 Locus TagPAM18_0258 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa M18 GI386059680 Locus TagPAM18_3619 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa M18 GI386059680 Locus TagPAM18_3619 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa M18 GI386061444 Locus TagPAM18_5387 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa M18 GI386061444 Locus TagPAM18_5387 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa M18 GI386056327 Locus TagPAM18_0258 Descriptionsecreted protein Hcp

Ingroup 2

Strain	Pseudomonas aeruginosa B136-33
GI	478479571
Locus Tag	G655_16910
Description	secreted protein Hcp

StrainPseudomonas aeruginosa B136-33 GI478479721 Locus TagG655_17660 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa B136-33 GI478479571 Locus TagG655_16910 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa B136-33 GI478481724 Locus TagG655_27725 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa B136-33 GI478481724 Locus TagG655_27725 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa B136-33 GI478479571 Locus TagG655_16910 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa B136-33 GI478481724 Locus TagG655_27725 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa B136-33 GI478479721 Locus TagG655_17660 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa B136-33 GI478479721 Locus TagG655_17660 Descriptionsecreted protein Hcp