Ortholog Set 3910123

Ortholog Set 3910124

Analysis ID	3910123
Cluster ID	689
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0

Ortholog Set 3910126

Analysis ID	3910124
Cluster ID	689
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0

Ortholog Set 3910135

Analysis ID	3910126
Cluster ID	689
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0

Ortholog Set 3910128

Analysis ID	3910135
Cluster ID	689
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0

Ortholog Set 3910129

Analysis ID	3910128
Cluster ID	689
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0

Analysis ID	3910129
Cluster ID	689
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0
Analysis Type	Reciprocal Best Blast No Ortholuge analysis performed on these strains. This may be the case when there is a very short phylogenetic distance between ingroup strains relative to an outgroup species.

Ingroup 1

Strain	Pseudomonas syringae pv. syringae B728a
GI	66044241
Locus Tag	Psyr_0988
Description	integrase catalytic subunit

StrainPseudomonas syringae pv. syringae B728a GI66043919 Locus TagPsyr_0652 Descriptionintegrase catalytic subunit StrainPseudomonas syringae pv. syringae B728a GI66043919 Locus TagPsyr_0652 Descriptionintegrase catalytic subunit StrainPseudomonas syringae pv. syringae B728a GI66047835 Locus TagPsyr_4608 Descriptionintegrase catalytic subunit StrainPseudomonas syringae pv. syringae B728a GI66047835 Locus TagPsyr_4608 Descriptionintegrase catalytic subunit StrainPseudomonas syringae pv. syringae B728a GI66044241 Locus TagPsyr_0988 Descriptionintegrase catalytic subunit

Ingroup 2

Strain	Pseudomonas syringae pv. phaseolicola 1448A
GI	71733984
Locus Tag	PSPPH_1845
Description	ISPsy24, transposase orfB

StrainPseudomonas syringae pv. phaseolicola 1448A GI71735302 Locus TagPSPPH_3739 DescriptionISPsy24, transposase orfB StrainPseudomonas syringae pv. phaseolicola 1448A GI71733984 Locus TagPSPPH_1845 DescriptionISPsy24, transposase orfB StrainPseudomonas syringae pv. phaseolicola 1448A GI71733984 Locus TagPSPPH_1845 DescriptionISPsy24, transposase orfB StrainPseudomonas syringae pv. phaseolicola 1448A GI71735302 Locus TagPSPPH_3739 DescriptionISPsy24, transposase orfB StrainPseudomonas syringae pv. phaseolicola 1448A GI71735302 Locus TagPSPPH_3739 DescriptionISPsy24, transposase orfB

Inparalogs to Ingroup 2

Strain	Pseudomonas syringae pv. phaseolicola 1448A
GI	71733282
Locus Tag	PSPPH_4988
Description	ISPsy24, transposase orfB

Strain	Pseudomonas syringae pv. phaseolicola 1448A
GI	71733282
Locus Tag	PSPPH_4988
Description	ISPsy24, transposase orfB

Strain	Pseudomonas syringae pv. phaseolicola 1448A
GI	71725221
Locus Tag	PSPPH_A0141
Description	ISPsy24, transposase orfB

Strain	Pseudomonas syringae pv. phaseolicola 1448A
GI	71735907
Locus Tag	PSPPH_2798
Description	ISPsy24, transposase orfB

Strain	Pseudomonas syringae pv. phaseolicola 1448A
GI	71733282
Locus Tag	PSPPH_4988
Description	ISPsy24, transposase orfB

Strain	Pseudomonas syringae pv. phaseolicola 1448A
GI	71735907
Locus Tag	PSPPH_2798
Description	ISPsy24, transposase orfB

Strain	Pseudomonas syringae pv. phaseolicola 1448A
GI	71725221
Locus Tag	PSPPH_A0141
Description	ISPsy24, transposase orfB

Strain	Pseudomonas syringae pv. phaseolicola 1448A
GI	71725221
Locus Tag	PSPPH_A0141
Description	ISPsy24, transposase orfB

Strain	Pseudomonas syringae pv. phaseolicola 1448A
GI	71735907
Locus Tag	PSPPH_2798
Description	ISPsy24, transposase orfB