Ortholog Set 3895404

Ortholog Set 3895405

Analysis ID	3895404
Cluster ID	490
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0

Ortholog Set 3895406

Analysis ID	3895405
Cluster ID	490
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0

Ortholog Set 3895407

Analysis ID	3895406
Cluster ID	490
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0

Ortholog Set 3895408

Analysis ID	3895407
Cluster ID	490
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0

Ortholog Set 3895409

Analysis ID	3895408
Cluster ID	490
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0

Analysis ID	3895409
Cluster ID	490
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0
Analysis Type	Reciprocal Best Blast No Ortholuge analysis performed on these strains. This may be the case when there is a very short phylogenetic distance between ingroup strains relative to an outgroup species.

Ingroup 1

Strain	Pseudomonas aeruginosa RP73
GI	514412925
Locus Tag	M062_08085
Description	hypothetical protein

StrainPseudomonas aeruginosa RP73 GI514413382 Locus TagM062_27760 Descriptionhypothetical protein StrainPseudomonas aeruginosa RP73 GI514413382 Locus TagM062_27760 Descriptionhypothetical protein StrainPseudomonas aeruginosa RP73 GI514412689 Locus TagM062_01295 Descriptionhypothetical protein StrainPseudomonas aeruginosa RP73 GI514412689 Locus TagM062_01295 Descriptionhypothetical protein StrainPseudomonas aeruginosa RP73 GI514412925 Locus TagM062_08085 Descriptionhypothetical protein

Ingroup 2

Strain	Pseudomonas aeruginosa C3719
GI	254234608
Locus Tag	PACG_00471
Description	secreted protein Hcp

StrainPseudomonas aeruginosa C3719 GI254234608 Locus TagPACG_00471 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa C3719 GI254237500 Locus TagPACG_03579 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa C3719 GI254234608 Locus TagPACG_00471 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa C3719 GI254237500 Locus TagPACG_03579 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa C3719 GI254237500 Locus TagPACG_03579 Descriptionsecreted protein Hcp