Ortholog Set 3780816

Ortholog Set 3780819

Analysis ID	3780816
Cluster ID	2223
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0

Ortholog Set 3780820

Analysis ID	3780819
Cluster ID	2223
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0

Analysis ID	3780820
Cluster ID	2223
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0
Analysis Type	Reciprocal Best Blast No Ortholuge analysis performed on these strains. This may be the case when there is a very short phylogenetic distance between ingroup strains relative to an outgroup species.

Ingroup 1

Strain	Pseudomonas putida KT2440
GI	26991126
Locus Tag	PP_4439
Description	ISPpu14, transposase Orf3

StrainPseudomonas putida KT2440 GI26990686 Locus TagPP_3981 DescriptionISPpu14, transposase Orf3 StrainPseudomonas putida KT2440 GI26990213 Locus TagPP_3501 DescriptionISPpu14, transposase Orf3

Inparalog 1

Strain	Pseudomonas putida KT2440
GI	26990669
Locus Tag	PP_3964
Description	ISPpu14, transposase Orf3

Inparalog 1

Strain	Pseudomonas putida KT2440
GI	26992071
Locus Tag	PP_5396
Description	ISPpu14, transposase Orf3

Inparalog 1

Strain	Pseudomonas putida KT2440
GI	26991129
Locus Tag	PP_4443
Description	ISPpu14, transposase Orf3

Ingroup 2

Strain	Pseudomonas putida S16
GI	339485670
Locus Tag	PPS_0737
Description	ISPpu14, transposase Orf3

StrainPseudomonas putida S16 GI339485670 Locus TagPPS_0737 DescriptionISPpu14, transposase Orf3 StrainPseudomonas putida S16 GI339485670 Locus TagPPS_0737 DescriptionISPpu14, transposase Orf3