Ortholog Set 3741008

Ortholog Set 3741009

Analysis ID	3741008
Cluster ID	887
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0

Ortholog Set 3741010

Analysis ID	3741009
Cluster ID	887
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0

Ortholog Set 3741011

Analysis ID	3741010
Cluster ID	887
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0

Ortholog Set 3741012

Analysis ID	3741011
Cluster ID	887
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0

Ortholog Set 3741013

Analysis ID	3741012
Cluster ID	887
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0

Ortholog Set 3741014

Analysis ID	3741013
Cluster ID	887
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0

Ortholog Set 3741015

Analysis ID	3741014
Cluster ID	887
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0

Ortholog Set 3741016

Analysis ID	3741015
Cluster ID	887
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0

Analysis ID	3741016
Cluster ID	887
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0
Analysis Type	Reciprocal Best Blast No Ortholuge analysis performed on these strains. This may be the case when there is a very short phylogenetic distance between ingroup strains relative to an outgroup species.

Ingroup 1

Strain	Pseudomonas aeruginosa DK2
GI	392985022
Locus Tag	PADK2_18160
Description	secreted protein Hcp

StrainPseudomonas aeruginosa DK2 GI392986949 Locus TagPADK2_27865 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa DK2 GI392985022 Locus TagPADK2_18160 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa DK2 GI392981672 Locus TagPADK2_01310 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa DK2 GI392981672 Locus TagPADK2_01310 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa DK2 GI392981672 Locus TagPADK2_01310 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa DK2 GI392986949 Locus TagPADK2_27865 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa DK2 GI392985022 Locus TagPADK2_18160 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa DK2 GI392986949 Locus TagPADK2_27865 Descriptionsecreted protein Hcp

Ingroup 2

Strain	Pseudomonas aeruginosa 2192
GI	254243846
Locus Tag	PA2G_04674
Description	secreted protein Hcp

StrainPseudomonas aeruginosa 2192 GI254239861 Locus TagPA2G_00489 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa 2192 GI254239861 Locus TagPA2G_00489 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa 2192 GI254243846 Locus TagPA2G_04674 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa 2192 GI254239861 Locus TagPA2G_00489 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa 2192 GI254243362 Locus TagPA2G_04174 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa 2192 GI254243846 Locus TagPA2G_04674 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa 2192 GI254243362 Locus TagPA2G_04174 Descriptionsecreted protein Hcp StrainPseudomonas aeruginosa 2192 GI254243362 Locus TagPA2G_04174 Descriptionsecreted protein Hcp