Ortholog Set 3517181

Ortholog Set 3517177

Analysis ID	3517181
Cluster ID	3426
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0

Ortholog Set 3517172

Analysis ID	3517177
Cluster ID	3426
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0

Ortholog Set 3517189

Analysis ID	3517172
Cluster ID	3426
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0

Ortholog Set 3517168

Analysis ID	3517189
Cluster ID	3426
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0

Ortholog Set 3517167

Analysis ID	3517168
Cluster ID	3426
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0

Ortholog Set 3517175

Analysis ID	3517167
Cluster ID	3426
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0

Analysis ID	3517175
Cluster ID	3426
Ortholuge Class	No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set. SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1	0
Ratio 2	0
Local FDR for Ratio 1	0
Local FDR for Ratio 2	0
Analysis Type	Reciprocal Best Blast No Ortholuge analysis performed on these strains. This may be the case when there is a very short phylogenetic distance between ingroup strains relative to an outgroup species.

Ingroup 1

Strain	Pseudomonas aeruginosa PA7
GI	152985727
Locus Tag	PSPA7_4697
Description	hypothetical protein

StrainPseudomonas aeruginosa PA7 GI152985727 Locus TagPSPA7_4697 Descriptionhypothetical protein StrainPseudomonas aeruginosa PA7 GI152985727 Locus TagPSPA7_4697 Descriptionhypothetical protein StrainPseudomonas aeruginosa PA7 GI152985727 Locus TagPSPA7_4697 Descriptionhypothetical protein StrainPseudomonas aeruginosa PA7 GI152985727 Locus TagPSPA7_4697 Descriptionhypothetical protein StrainPseudomonas aeruginosa PA7 GI152985727 Locus TagPSPA7_4697 Descriptionhypothetical protein StrainPseudomonas aeruginosa PA7 GI152985727 Locus TagPSPA7_4697 Descriptionhypothetical protein

Inparalog 1

Strain	Pseudomonas aeruginosa PA7
GI	152989179
Locus Tag	PSPA7_4229
Description	hypothetical protein

Inparalog 1

Strain	Pseudomonas aeruginosa PA7
GI	152989179
Locus Tag	PSPA7_4229
Description	hypothetical protein

Inparalog 1

Strain	Pseudomonas aeruginosa PA7
GI	152987009
Locus Tag	PSPA7_2390
Description	hypothetical protein

Inparalog 1

Strain	Pseudomonas aeruginosa PA7
GI	152989179
Locus Tag	PSPA7_4229
Description	hypothetical protein

Inparalog 1

Strain	Pseudomonas aeruginosa PA7
GI	152987009
Locus Tag	PSPA7_2390
Description	hypothetical protein

Inparalog 1

Strain	Pseudomonas aeruginosa PA7
GI	152985998
Locus Tag	PSPA7_2525
Description	hypothetical protein

Inparalog 1

Strain	Pseudomonas aeruginosa PA7
GI	152989179
Locus Tag	PSPA7_4229
Description	hypothetical protein

Inparalog 1

Strain	Pseudomonas aeruginosa PA7
GI	152987009
Locus Tag	PSPA7_2390
Description	hypothetical protein

Inparalog 1

Strain	Pseudomonas aeruginosa PA7
GI	152989179
Locus Tag	PSPA7_4229
Description	hypothetical protein

Inparalog 1

Strain	Pseudomonas aeruginosa PA7
GI	152985998
Locus Tag	PSPA7_2525
Description	hypothetical protein

Inparalog 1

Strain	Pseudomonas aeruginosa PA7
GI	152989179
Locus Tag	PSPA7_4229
Description	hypothetical protein

Inparalog 1

Strain	Pseudomonas aeruginosa PA7
GI	152985998
Locus Tag	PSPA7_2525
Description	hypothetical protein

Inparalog 1

Strain	Pseudomonas aeruginosa PA7
GI	152987009
Locus Tag	PSPA7_2390
Description	hypothetical protein

Inparalog 1

Strain	Pseudomonas aeruginosa PA7
GI	152989179
Locus Tag	PSPA7_4229
Description	hypothetical protein

Inparalog 1

Strain	Pseudomonas aeruginosa PA7
GI	152985998
Locus Tag	PSPA7_2525
Description	hypothetical protein

Inparalog 1

Strain	Pseudomonas aeruginosa PA7
GI	152985998
Locus Tag	PSPA7_2525
Description	hypothetical protein

Inparalog 1

Strain	Pseudomonas aeruginosa PA7
GI	152987009
Locus Tag	PSPA7_2390
Description	hypothetical protein

Inparalog 1

Strain	Pseudomonas aeruginosa PA7
GI	152987009
Locus Tag	PSPA7_2390
Description	hypothetical protein

Inparalog 1

Strain	Pseudomonas aeruginosa PA7
GI	152987009
Locus Tag	PSPA7_2390
Description	hypothetical protein

Inparalog 1

Strain	Pseudomonas aeruginosa PA7
GI	152985998
Locus Tag	PSPA7_2525
Description	hypothetical protein

Inparalog 1

Strain	Pseudomonas aeruginosa PA7
GI	152985998
Locus Tag	PSPA7_2525
Description	hypothetical protein

Ingroup 2

Strain	Pseudomonas aeruginosa DK2
GI	392983122
Locus Tag	PADK2_08570
Description	hypothetical protein

StrainPseudomonas aeruginosa DK2 GI392985698 Locus TagPADK2_21580 Descriptionhypothetical protein StrainPseudomonas aeruginosa DK2 GI392983576 Locus TagPADK2_10880 Descriptionhypothetical protein StrainPseudomonas aeruginosa DK2 GI392983568 Locus TagPADK2_10840 Descriptionhypothetical protein StrainPseudomonas aeruginosa DK2 GI392985361 Locus TagPADK2_19875 Descriptionhypothetical protein StrainPseudomonas aeruginosa DK2 GI392984027 Locus TagPADK2_13155 Descriptionhypothetical protein StrainPseudomonas aeruginosa DK2 GI392986092 Locus TagPADK2_23570 Descriptionhypothetical protein