Ortholog Set 3412077

Ortholog Set 3412092

Analysis ID 3412077
Cluster ID 4025
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 3412093

Analysis ID 3412092
Cluster ID 4025
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 3412094

Analysis ID 3412093
Cluster ID 4025
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 3412095

Analysis ID 3412094
Cluster ID 4025
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 3412096

Analysis ID 3412095
Cluster ID 4025
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 3412097

Analysis ID 3412096
Cluster ID 4025
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 3412098

Analysis ID 3412097
Cluster ID 4025
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 3412100

Analysis ID 3412098
Cluster ID 4025
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 3412101

Analysis ID 3412100
Cluster ID 4025
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 3412102

Analysis ID 3412101
Cluster ID 4025
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 3412104

Analysis ID 3412102
Cluster ID 4025
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 3412105

Analysis ID 3412104
Cluster ID 4025
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 3412091

Analysis ID 3412105
Cluster ID 4025
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 3412106

Analysis ID 3412091
Cluster ID 4025
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 3412079

Analysis ID 3412106
Cluster ID 4025
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 3412083

Analysis ID 3412079
Cluster ID 4025
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 3412084

Analysis ID 3412083
Cluster ID 4025
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 3412085

Analysis ID 3412084
Cluster ID 4025
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 3412078

Analysis ID 3412085
Cluster ID 4025
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 3412087

Analysis ID 3412078
Cluster ID 4025
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 3412088

Analysis ID 3412087
Cluster ID 4025
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 3412089

Analysis ID 3412088
Cluster ID 4025
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0

Ortholog Set 3412080

Analysis ID 3412089
Cluster ID 4025
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0
Analysis ID 3412080
Cluster ID 4025
Ortholuge Class

No Ortholuge class assigned. This is often the case when a suitable outgroup species is available to perform Ortholuge analysis, however an outgroup ortholog is not available for this particular ortholog set.

SSD Borderline Similar Non-SSD Divergent Non-SSD RBB
Ratio 1 0
Ratio 2 0
Local FDR for Ratio 1 0
Local FDR for Ratio 2 0
Analysis Type Reciprocal Best Blast

No Ortholuge analysis performed on these strains. This may be the case when there is a very short phylogenetic distance between ingroup strains relative to an outgroup species.

Ingroup 1

StrainPseudomonas putida F1
GI148546666
Locus TagPput_1426
Descriptiontransposase, IS111A/IS1328/IS1533
StrainPseudomonas putida F1 GI148549089 Locus TagPput_3883 Descriptiontransposase, IS111A/IS1328/IS1533 StrainPseudomonas putida F1 GI148547814 Locus TagPput_2597 Descriptiontransposase, IS111A/IS1328/IS1533 StrainPseudomonas putida F1 GI148546504 Locus TagPput_1261 Descriptiontransposase, IS111A/IS1328/IS1533 StrainPseudomonas putida F1 GI148546666 Locus TagPput_1426 Descriptiontransposase, IS111A/IS1328/IS1533 StrainPseudomonas putida F1 GI148546666 Locus TagPput_1426 Descriptiontransposase, IS111A/IS1328/IS1533 StrainPseudomonas putida F1 GI148550193 Locus TagPput_4991 Descriptiontransposase, IS111A/IS1328/IS1533 StrainPseudomonas putida F1 GI148546289 Locus TagPput_1046 Descriptiontransposase, IS111A/IS1328/IS1533 StrainPseudomonas putida F1 GI148546504 Locus TagPput_1261 Descriptiontransposase, IS111A/IS1328/IS1533 StrainPseudomonas putida F1 GI148547814 Locus TagPput_2597 Descriptiontransposase, IS111A/IS1328/IS1533 StrainPseudomonas putida F1 GI148546504 Locus TagPput_1261 Descriptiontransposase, IS111A/IS1328/IS1533 StrainPseudomonas putida F1 GI148546289 Locus TagPput_1046 Descriptiontransposase, IS111A/IS1328/IS1533 StrainPseudomonas putida F1 GI148547814 Locus TagPput_2597 Descriptiontransposase, IS111A/IS1328/IS1533 StrainPseudomonas putida F1 GI148549089 Locus TagPput_3883 Descriptiontransposase, IS111A/IS1328/IS1533 StrainPseudomonas putida F1 GI148549089 Locus TagPput_3883 Descriptiontransposase, IS111A/IS1328/IS1533 StrainPseudomonas putida F1 GI148547814 Locus TagPput_2597 Descriptiontransposase, IS111A/IS1328/IS1533 StrainPseudomonas putida F1 GI148546504 Locus TagPput_1261 Descriptiontransposase, IS111A/IS1328/IS1533 StrainPseudomonas putida F1 GI148549089 Locus TagPput_3883 Descriptiontransposase, IS111A/IS1328/IS1533 StrainPseudomonas putida F1 GI148550193 Locus TagPput_4991 Descriptiontransposase, IS111A/IS1328/IS1533 StrainPseudomonas putida F1 GI148546666 Locus TagPput_1426 Descriptiontransposase, IS111A/IS1328/IS1533 StrainPseudomonas putida F1 GI148550193 Locus TagPput_4991 Descriptiontransposase, IS111A/IS1328/IS1533 StrainPseudomonas putida F1 GI148546289 Locus TagPput_1046 Descriptiontransposase, IS111A/IS1328/IS1533 StrainPseudomonas putida F1 GI148546289 Locus TagPput_1046 Descriptiontransposase, IS111A/IS1328/IS1533 StrainPseudomonas putida F1 GI148550193 Locus TagPput_4991 Descriptiontransposase, IS111A/IS1328/IS1533

Ingroup 2

StrainPseudomonas putida S16
GI339489562
Locus TagPPS_4679
DescriptionIS111A/IS1328/IS1533, transposase
StrainPseudomonas putida S16 GI339489562 Locus TagPPS_4679 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339486049 Locus TagPPS_1122 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339486049 Locus TagPPS_1122 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339488000 Locus TagPPS_3099 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339485074 Locus TagPPS_0133 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339485074 Locus TagPPS_0133 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339489562 Locus TagPPS_4679 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339488000 Locus TagPPS_3099 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339488000 Locus TagPPS_3099 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339489562 Locus TagPPS_4679 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339485074 Locus TagPPS_0133 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339489562 Locus TagPPS_4679 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339486049 Locus TagPPS_1122 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339488000 Locus TagPPS_3099 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339485074 Locus TagPPS_0133 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339485074 Locus TagPPS_0133 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339485074 Locus TagPPS_0133 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339488000 Locus TagPPS_3099 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339486049 Locus TagPPS_1122 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339489562 Locus TagPPS_4679 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339486049 Locus TagPPS_1122 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339488000 Locus TagPPS_3099 DescriptionIS111A/IS1328/IS1533, transposase StrainPseudomonas putida S16 GI339486049 Locus TagPPS_1122 DescriptionIS111A/IS1328/IS1533, transposase

Inparalogs to Ingroup 2

StrainPseudomonas putida S16
GI339488068
Locus TagPPS_3169
DescriptionIS111A/IS1328/IS1533, transposase
StrainPseudomonas putida S16
GI339488068
Locus TagPPS_3169
DescriptionIS111A/IS1328/IS1533, transposase
StrainPseudomonas putida S16
GI339488068
Locus TagPPS_3169
DescriptionIS111A/IS1328/IS1533, transposase
StrainPseudomonas putida S16
GI339488068
Locus TagPPS_3169
DescriptionIS111A/IS1328/IS1533, transposase
StrainPseudomonas putida S16
GI339488068
Locus TagPPS_3169
DescriptionIS111A/IS1328/IS1533, transposase
StrainPseudomonas putida S16
GI339488068
Locus TagPPS_3169
DescriptionIS111A/IS1328/IS1533, transposase