| Strain | GI | Locus Tag | Description | Inparalogs | Classification |
|---|---|---|---|---|---|
| Pseudomonas putida W619 | 170719303 | PputW619_0116 | peptidase M3A and M3B thimet/oligopeptidase F | RBB | |
| Pseudomonas putida BIRD-1 | 386009763 | PPUBIRD1_0126 | Peptidase M3A and M3B, thimet/oligopeptidase F | RBB | |
| Pseudomonas putida F1 | 148545370 | Pput_0113 | peptidase M3A and M3B, thimet/oligopeptidase F | RBB | |
| Pseudomonas putida ND6 | 395446421 | YSA_05157 | peptidase M3A and M3B, thimet/oligopeptidase F | RBB | |
| Pseudomonas putida S16 | 339485001 | PPS_0060 | peptidase M3A and M3B, thimet/oligopeptidase F | RBB | |
| Pseudomonas putida DOT-T1E | 397693692 | T1E_0923 | peptidase M3A and M3B, thimet/oligopeptidase F | RBB |